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MRI Research

 

Where Multidisciplinary Expertise Drives MRI Innovation

 

 

The Peter S. Allen MRI Research Centre is built on the principle that collaboration across disciplines drives scientific advancement. By combining the expertise of researchers from fields like biomedical engineering, radiology, medicine, physics, and neuroscience, we are transforming the way MRI technology is used in research. Our multidisciplinary team works together to explore new applications of MRI, refine imaging techniques, and address complex scientific questions, providing invaluable insights into the human body and biological systems.

 

 

 

Brain

Brain

Advanced techniques such as diffusion imaging, functional MRI (fMRI), quantitative imaging and spectroscopy are used to study brain structure, connectivity, and metabolism, to understand healthy brain development and aging, and the impact of neurological conditions like stroke, multiple sclerosis, and ALS.

Cardiac

Cardiac

Specialized cardiac MRI techniques are used to assess cardiac health (e.g. in cancer patients), often utilizing MRI-compatible exercise equipment to study the effects of treatment and monitor heart function in real-time.

Body

Body imaging investigates lung health, body composition (muscle and fat distribution), overall body health, volumes of internal organs, and can aid in the early detection and treatment planning of diseases such as prostate cancer.

Body

Sequence development

Creation and refinement of specialized MRI sequences tailored for specific research needs, enabling and enhancing imaging capabilities across a range of brain, cardiac, and body imaging applications.

Sequence

 

 

Infrastructure and Resources

The Peter S. Allen MRI Research Centre is home to 3 fully research-dedicated MRI scanners:

3T Siemens Prisma is a state-of-the-art MRI developed by Siemens for clinical research. This system allows for development of advanced imaging techniques and offers a wide range of coils and sequences. It is equipped with a powerful gradient strength of up to 80 mT/m, enabling rapid imaging with high spatial resolution and improved signal-to-noise ratio.

Sequences available
Standard library of a Siemens medical system - Syngo XA30; addtional Siemens packages (SMS, MapIt); several "exprimental" sequences; in-house optimized sequences (heart and lung imaging, multi-nuclear imaging)

Coils available

Transmit:

  • whole body (2 channel)

Receivers:
  • whole body
  • head/neck 20 channel
  • head/neck 64 channel
  • spine array 32 channel
  • 2x body array 18 channel
  • TxRx Knee (1Tx, 15 Rx channel) (QED)
  • hand/Wrist 16 channel
  • loop (3,7,11 cm)
  • flexible coils (large, small) 4 channel
  • 2x special purpose 4 channel
  • breast coil 10+16 channel (Sentinel)
  • 31P 1H TxRx surface (Rapid)
  • 23Na 1H head (Rapid)
  • small resonator (35mm birdcage) (Rapid)

Peripheral systems available
  • MedRad power injector
  • Invivo Expression patient monitor (non-invasive blood pressure, heart rate, oxygen saturation, ECG)
  • projector with in-bore screen, response buttons and joystick, presentation computer (functional MRI setup)
  • Elastography
  • Ergostep (exercise equipment)

3T Siemens Prisma

4.7T Human Research Scanner is a high-field system capable of more advanced (higher resolution) imaging and signal-to-noise than a 3T system, while avoiding the patient discomfort and technical challenges of ultra-high field systems. This system enables multi-nuclei imaging (such as sodium imaging), functional MRI, or MR spectroscopy.

4.7T system can be operated by either of the two spectrometer systems:
Legacy Varian VnmrJ (max 4 receive channels)
MR Solutions Evo (8 transmit, 32 receive channels)

Typical clinical research applications

  • stroke
  • MS (multiple sclerosis)
  • Parkinson's
  • major depression and anxiety disorders
Peripheral systems available
  • MedRad heart rate and and oxygen saturation monitor
  • projector with in-bore screen, 32" LCD screen, response buttons, presentation computer (functional MRI setup)

4.7T Human Research Scanner

3T Bruker Pre-clinical PET/MR Scanner integrates 3T MRI technology with high-performance PET imaging, providing exceptional spatial resolution and sensitivity. Its advanced hardware enables researchers to obtain high-quality, simultaneous anatomical and functional imaging, offering powerful insights into tissue structures and metabolic processes at the pre-clinical stage.

MRI coils include volume coils with inner diameter of 23, 30, 40, 60, 72 and 82mm and 4-channel array coils for brain and cardiac imaging.

PET Insert enables simultaneous PET/MR imaging, offering excellent spatial resolution (~1.2 mm or better) and sensitivity for molecular and functional imaging studies. This allows for precise co-registration of metabolic and anatomical data.

Subject Monitoring includes respiratory gating, cardiac monitoring, and temperature regulation. This ensures optimal imaging conditions and minimizes motion artifacts, improving the accuracy of longitudinal studies.

3T Bruker Pre-clinical PET/MR Scanner

 

 

Select Publications



T1-weighted MRI texture analysis in amyotrophic lateral sclerosis patients stratified by the D50 progression model. Parnianpour P, Steinbach R, Buchholz IJ, Grosskreutz J, Kalra S. Brain Communications. 2024 Nov 5;6(6):fcae389. doi: 10.1093/braincomms/fcae389. eCollection 2024. ​ ​

Sodium MRI of the skin using a surface coil to investigate and reduce signal loss and bias. Zhu J, Beaulieu C, Damji K, Stobbe R. Magnetic Resonance in Medicine. 2024 Oct 27. doi: 10.1002/mrm.30343. Online ahead of print. ​​

Protocol for a pilot study: Feasibility of a web-based platform to improve nutrition, mindfulness, and physical function in people living with Post COVID-19 condition (BLEND). Montes-Ibarra M, Godziuk K, Thompson RB, Chan CB, Pituskin E, Gross DP, Lam G, Schlogl M, Felipe Mota J, Paterson DI, Prado CM. Methods. 2024 Oct 9;231:186-194. doi: 10.1016/j.ymeth.2024.10.004. Online ahead of print. ​​

Phonological, orthographic and morphological skills are related to structural properties of ventral and motor white matter pathways in skilled and impaired readers. Reed A, Huynh T, Ostevik AV, Cheema K, Sweneya S, Craig J, Cummine J. Applied Neuropsychology: Adult. 2024 Sep 17:1-12. doi: 10.1080/23279095.2024.2397036. Online ahead of print.

For a complete list of publications, see our Google Scholar page

Our research is funded by:

  • Funding - CFI
  • Funding - NSERC
  • Funding - CIHR
  • Funding - H_S
  • Funding - MS
  • Funding - Stollery
  • Funding - UHF

 

 

Click here if you are interested in starting a new research project


The MRI Centre is accessible to all academic and clinical researchers, and is maintained in large part by the hourly fees which those research users pay.
The grant-funded user fee is currently the same on both human MRI systems at $600 per hour for scanner usage. These hourly fees are in line with other MRI research facilities across Canada. Scan time should include patient preparation, data back-up and clean-up of the scan room. Scan time for the optimization of MRI protocol parameters should be requested in grant application as well. The absolute minimum scan time that can be booked or billed is 30 minutes.

Note that the scan time fee also includes the use of a certified MRI technologist for the Siemens 3T Prisma and a Radiology research nurse on all MRI systems, if they are required for the study. These personnel are available during the day Monday-Friday. Effective September 1, 2019, there is a new $50/scan surcharge for the nurse. Additional technical personnel are required to run the 4.7T MRI. A Bracco Expression MRI compatible patient monitor for non-invasive blood pressure, ECG, and pulse oximetry (3T only), Medrad and Nonin pulse oximeters (4.7T only), Medrad intra-venous power injector (3T only), and functional MRI hardware are available at no extra charge. The costs of contrast agent are extra.

The user fee provides coverage for salaries for the MRI engineer and support staff, all self maintenance of the 4.7T MRI systems (e.g. cold head, electronic parts, helium fills, software updates, etc), and vendor service contract for the Siemens 3T Prisma. The user fees do not include any MR image or spectral analysis.

All new projects are subject to:
  • appropriate research ethics approval
  • approval by the MRI Research Centre Research Committee, which requires submitting of New Project form.
  • attending a Safety and Orientation class, which is offered every 2nd Wednesday of the month @ 8:30am in the Centre by .
More details about starting a new project are available in this document.

Additional documents available:

Please contact us for additional guidance and resources:

Brain imaging (diffusion, aging, stroke):

Cardiac and body imaging:

Brain imaging (relaxometry, QSM):

Sodium imaging, sequence development:

Brain imaging (fMRI, MR Spectroscopy), clinical trials: